Well, apart from a de-laminating windscreen, two side mirror motor replacements and the impending brake simulator...
The paintwork is well below the quality I have had on previous cars (the last three of which used eco friendly paint). It scratches easily, bird/insect dropping leave blemishes and the black roof has tiny spot blemishes in the lacquer.
The light grey interior is great and makes for a very airy and open feel in the cabin.. but the light grey accent on the bottom of the steering wheel is a mistake. It gets grubby easily, and needs wiping regularly with a wet wipe to keep it looking clean.
The spare wheel doesn't bother me, my last four or five cars never had one. However, I did buy a can of Holts tyre foam, as this can be removed if used, and means a puncture can be repaired.. whereas the OEM stuff buggers up this possibility.
I would have liked a light in the glovebox, and an auto dimming mirror.